Francisco Castellanos

I'm interested in

About

Born in the resplendent city of Riobamba and raised in Quito, I lived two decades of my life amongst the amazing Ecuadorian mountainous landscapes. From an early age, I was engrained with understanding the importance of protecting life in all of its forms. Quickly my love for animals, Biology and Ecology grew and eventually led me to Argentina, where I pursued a Bachelor in Genetics.

B.S, M.S & PhD Student.


While pursuing my undergraduate degree at Universidad Nacional de Misiones, I ventured in studying chromosomal features in the elusive Myotis bat genus. Unsolved questions from this work woke in me a particular interest in Transposable Elements and in their potential to be used as molecular markers to solve intricate phylogenetic relationships in this group.

As part of my Master of Science projects at the Ray Lab, my research on immune response of bats enabled me to infer the evolution of gene families related to antimicrobial peptides in this remarkable group of mammals. Additionally, I laid the groundwork to characterize a specific type of Transposable Element to construct homoplasy-free phylogenies in Chiroptera. Currently, as a PhD student, one of my projects focuses on optimizing this pipeline with the aim of expanding its applicability to other taxa. While my primary research interests revolve around taxonomy, I also explore other adaptive traits that render bats unique among mammals, with metabolism being a key focus.

As a member of the Fundación Oso Andino, my involvement extends beyond Genetics and bat research. I lead projects that seek to study the behavior of large mammals by means of analyzing GPS tracking data. Using novel bioinformatic non-parametric methods, I am looking to understand how Andean bears, Andean foxes and tapirs, make use of their natural habitat and what resources and environmental variables may have an impact on how they move across their utilization distributions.

Resume

Education

Biology PhD student

Starting 2024

The Ray Laboratory, Texas Tech University, Lubbock, USA.

Master of Science in Biology

2023

The Ray Laboratory, Texas Tech University, Lubbock, USA.

Genetics Bachelor

2020

Universidad Nacional de Misiones, Posadas, Argentina.

Thesis: Cytogenetic and molecular studies in species of the Genus Myotis in Northern Argentina.

Publications

Published

2023


Castellanos, F.X., Moreno-Santillan, D., Hughes, G.M., ..., Corthals, A.P., Ray, D.A. and Dávalos, L.M. The evolution of antimicrobial peptides in Chiroptera. Frontiers in Immunology 14. Online access.

2021


Castellanos, A., Castellanos, F. X., Kays, R. and Brito, J. 2021. A pilot study on the home range and movement patterns of the Andean Fox Lycalopex culpaeus (Molina, 1782) in Cotopaxi National Park, Ecuador. Mammalia 86(1), 22-26. Online access.

2019


Sánchez, M.S., Labaroni C.A., Castellanos, F.X. and Baldo, D.J. 2019. Glyphonycteris, O. Thomas, 1896 (Chiroptera: Phyllostomidae: Glyphonycterinae),
a new genus of bats for Argentina, with commentary on its karyotype. Mastozoología Neotropical, 26(2):420-429. Online access.


Castellanos, A., Castellanos, F.X., and Vallejo, A.F. 2019. Panthera onca In: Brito, J., Camacho, M. A., Romero, V. Vallejo, A. F. (eds). Mamíferos del Ecuador. Version 2018.0. Zoology Museum, Pontificia Universidad Católica del Ecuador.
Online access.

Awards

2023

Bat Biology Foundation Award

Partial award granted to undertake field campaigns in several Reserves and National Parks in Ecuador.

2022

General Fellowships for New and Continuing Graduate Students

Fellowship granted by Texas Tech University covered tuition costs over the summer period plus research funds.

Professional Experience

Bat1K Regional Chair

Present

Bat1K Consortium, USA.

  • Regional Chair for Ecuador.

Research collaborator

2021 - Present

The Ray Lab, Texas Tech University, TX, USA.

  • RAPID: Collaborative Research: Immunological adaptations in bats to moderate the effect of coronavirus infection
  • RoL: FELS: EAGER: Collaborative Research: Genomics of exceptions to scaling of longevity to body size.
2018 - Present

Andean Bear Foundation, Quito, Ecuador.

  • Space use, and movement Ecology of large mammals in the Ecuadorian Andes.

Teaching Assistant

2021 - Present

Texas Tech University, TX, USA.

  • Biology I. BIOL1403. Fall 2021/2022.
  • Biology II. BIOL1404. Spring 2022/2023.
  • Genetics. BIOL3416. Summer 2022.
  • Genomes and Genome Evolution. BIOL4340. Fall 2023.

Conferences

Oral Presentations

2023

Evolution 2023. Albuquerque, NM, USA. June 2023.

deAMPlifying the Immune Response? Antimicrobial Peptides Evolution in Chiroptera.

Poster Presentations

2022

19thIBCR - 50thNASBR. Austin, TX, USA. August 2022.

Castellanos, F.X., Moreno-Santillán, D., Corthals, A., Martin, K., Moore, M.S., Lim, M., Lama, T.M., Paulat, N., Sipperly, N., Davalos, L.M., Ray, D.A. deAMPlifying the Immune Response: Antimicrobial Peptides Evolution in Chiroptera.

2018

XXXI Argentine Conference of Mastozoology. La Rioja, Argentina.

Castellanos, F.X., Labaroni C.A., Ferro, J.M., Taffarel, A., Baldo, D.J, and Sánchez, M.S. Chromosomal studies in some species of the genus Myotis (Chiroptera: Vespertilionidae) from Northern Argentina.


Download the complete pdf version of my CV here.

Skills

My current bioinformatics projects demand some skills on programming languages, I've listed the ones I use and understand the most. I supplement my coding skills with some knowledge on design software since I enjoy preparing or polishing figures for presentations and/or posters.

R 90%
Bash 80%
Python 50%
Photoshop 90%
Illustrator 70%

Portfolio

This is some of the work I've done using R, and the packages: movevis, rayshader, and of course, the tidyverse.

  • All
  • GIF
  • TIDY
  • QUARTO
  • ADOBE
GIF
GIF
TIDY
QUARTO

Contact

Location:

Department of Biological Sciences,
Texas Tech University.
2901 Main St, Lubbock, TX 79409